Category: Science

Anesthesia and Consciousness

As anyone unfortunate to have experienced with any frequency will tell you, anesthesia is a strange thing. One moment you’re in the operating room, chatting nervously with the people who will soon hold your life in their hands, and the next, you’re staring at the ceiling of the recovery room. It’s not like sleep, with it’s natural transition from one state to the next; it’s abrupt, and disorienting.

The Atlantic recently published long-form article roughly focusing on consciousness through the lens of anesthesia. While I wasn’t in love with how the article handled the discussion of awareness during surgery, overall it’s well written and touches on many of the key issues involved in trying to figure out this whole consciousness thing. Moreover, it reminded me of a talk given by Gilles Plourde at the Cognitive Sciences Summer Institute on the Evolution and Function of Consciousness, which I had the honor of attending last summer. Dr. Plourde (who I’m surprised wasn’t mentioned in the article) is an anesthesiologist with a tremendous moustache who has done some really interesting work using brain imaging and electrophysiology to try and figure out what exactly anesthetics do to disrupt consciousness (tl;dr, it’s probably got a lot to do with thalamocortical communication). All of the sessions during the Summer Institute were recorded and and put online, and I’ve embedded Dr. Plourde’s talk below (though I strongly encourage you to check out the full list).

Somewhat related, there have been a bunch interesting papers recently on how anesthetics influence functional connectivity in the brain:

Lewis, L. D., Weiner, V. S., Mukamel, E. A., Donoghue, J. A., Eskandar, E. N., Madsen, J. R., et al. (2012). Rapid fragmentation of neuronal networks at the onset of propofol-induced unconsciousness. Proceedings of the National Academy of Sciences of the United States of America, 109(49), E3377–86. doi:10.1073/pnas.1210907109

Heine, L., Soddu, A., Gómez, F., Vanhaudenhuyse, A., Tshibanda, L., Thonnard, M., et al. (2012). Resting state networks and consciousness: alterations of multiple resting state network connectivity in physiological, pharmacological, and pathological consciousness States. Frontiers in Psychology, 3, 295. doi:10.3389/fpsyg.2012.00295

Liang, Z., King, J., & Zhang, N. (2012). Intrinsic organization of the anesthetized brain. The Journal of Neuroscience, 32(30), 10183–10191. doi:10.1523/JNEUROSCI.1020-12.2012

Schröter, M. S., Spoormaker, V. I., Schorer, A., Wohlschläger, A., Czisch, M., Kochs, E. F., et al. (2012). Spatiotemporal Reconfiguration of Large-Scale Brain Functional Networks during Propofol-Induced Loss of Consciousness. The Journal of Neuroscience, 32(37), 12832–12840. doi:10.1523/JNEUROSCI.6046-11.2012

 

Introduction to NMR/MRI

FMRI has become an industry standard for neuroimaging, and while it’s relatively easy to understand the basics of the BOLD response and how neural activity can effect blood flow, trying to visualize the fundamentals of MRI physics can be really difficult. Luckily, friendly New Zealand company Magritek has produced an incredibly easy to follow and informative series of videos covering the basic physics of magnetic resonance all the way up through 2D MRI. They also make a really neat desktop MRI apparatus that uses the Earth’s magnetic field as its primary field, thus avoiding the need for cryogenics and superconducting magnets.

CNS 2011

My trip to San Francisco was possible largely thanks to the hospitality of my best friend Rupe, who has an incredible view from his balcony.

Earlier this month I had the opportunity to attend the Cognitive Neuroscience Society 2011 Annual Meeting in beautiful San Francisco, where my lab presented some of our recent research.

Sylvia, Dr. Mangels, & Belèn with our poster: "Task goals and achievement mindset influence attention to feedback and learning success in a challenging memory task"

This was my first time at a big academic conference, and I really had an incredible time. Few things make me happier than interesting ideas and intelligent people, and CNS provided 40 solid hours of learning and conversation which left me smiling like an idiot by the time I got on the plane back to New York. Aside from filling 25 pages of my Moleskine with notes (which I’m in the process of transcribing and putting online), the chance to talk with many of the names I’ve been reading for years was really exciting, and possible in no small part thanks to the fact that my advisor turned out to be friends with (or have worked with) almost everyone I wanted to meet. It was particularly great to chat with Roberto Cabeza, whose Attention to Memory model inspired my insight research. On a more practical level, it was really valuable to be able to talk with current graduate students in programs and labs I’m considering applying to for my PHD, and learned some important things for when it comes time to make my decision.

I’m sure I would have enjoyed the conference had I gone on my own, but it was great to be there with 5 other members of my lab. Though I met a bunch of great people at the Student Society dinner, it was really nice to always have someone I knew to grab lunch with or chat to during coffee breaks.

Equally important to having people to talk to is having people to watch your things while you collapse between sessions.

The conference went from 8am to 7pm every day, so I didn’t get much of a chance to see friends in the city, but I did experience my first authentic Mission burrito during our Lab dinner at Pancho Villa Taqueria. The foursquare tips said to get my burrito mojado (wet, thus the sauce and cheese), and it was definitely the right decision.

The horchata was also excellent.

I also rode the cable car for the first time, which I had somehow neglected to try despite all the time I’ve spent in San Francisco. I couldn’t help feeling like a monkey as I hung off the side (thanks Eddie Izzard), but it was preferable to having to walk back up Nob hill to where I was staying.

I’ll post a note with a link when I get my notes up online, but for now, I leave you with nightmare EEG baby courtesy of the EGI booth.

EEG baby knows your darkest secrets.

P.S: Tal Yarkoni, currently a post-doc at CU Boulder, is not just a talented researcher and blogger, but also a very funny man. Check out his CNS timeline for a good laugh.

Watson

Dave, who knows more than a bit about this sort of complex computer mumbo-jumbo, pointed out that Watson likely isn’t actually processing the questions semantically, but rather basing its answers on statistical relationships. Though this doesn’t significantly change the things I address in my post, its an important distinction to make.

This evening was the first airing of the long-awaited Jeopardy! match between two of the game’s most successful players and Watson, a question-parsing supercomputer developed by IBM. It’s obvious that big Blue wouldn’t have given the go ahead for an official match until they could be relatively sure of a victory (or at least holding their own), that knowledge doesn’t make watching this machine play any less impressive. At least judging from what I’ve seen, Watson seems to be pretty on-par with the best human players, if not a little bit better, though that got me wondering about how much of the computer’s ability was due to its processing, and how much benefit it got from it uniquely non-human characteristics.

Our lab does a lot of work on investigating how things like emotion, anxiety, and stress influence learning, memory, and cognition. We often do this by having study participants answer a series of general knowledge trivia questions under different experimental manipulations. Put simply, our research and that of other labs has shown that stress of being in a test environment, anxiety about getting the answers right and, and focus on negative emotion if you get an answer wrong, all contribute to a person doing significantly worse in these kind of situations than others who aren’t as stressed, worried, or sensitive to negative feedback.

Add to those relatively high-level concerns the fact that humans are easy to distract, have different reading speeds, make inconsistent muscle movements, and are subject to things like being hungry or tired. Compare these facts to a computer who never needs to eat or sleep, has only one possible goal (answering questions), and doesn’t have any feelings to be hurt or things to worry about.

Suddenly bringing a human to a trivia fight might not be the best idea.

Of course, there are many areas where humans have a leg up on our robotic competition, particularly when it comes to “creative” thinking, language use, and joking. That being said, Watson seems to be surprisingly good at the kind of word-play problems that are common on Jeopardy!, which might be a good indication of how close it is to our level of ability.

Looking at the big picture, competing on a game show is unimportant compared to the possible real-world applications of a technology like Watson. As computers become more and more able to do things historically only done by humans, an obvious question is when that all-important line is crossed and the computers are better at being us than we are.

Though there are many ways to determine where this point is, and equally as many arguments against any particular measure, lets stick with Jeopardy! for a second. The way I see it, to be better than a human at answering trivia questions, Watson only has to be as good as the best human player, at least in terms of “thinking” ability. In a game between Watson and a human champion with exactly equal semantic-processing/question-answering abilities, the computer will always win. Because Watson doesn’t care if it gets a question wrong, but Ken Jennings really doesn’t want to be beaten by a computer. Because Watson will always hit the buzzer at exactly the right time, and Joe Human might slip. For all the reasons I talked about above, Watson doesn’t have to be any smarter than a human to beat us.

The Science of Morality

I was lucky last night to be able to attend a fantastic lecture panel on the Science of Morality at the 92stY as part of the World Science Festival. Philosophers Daniel Dennett and Patricia Churchland, and neuroscientists Antonio Damasio and Marc Hauser discussed the philosophy, psychology, and biology of a fundamental aspect of human nature. Below are some of the more interesting ideas discussed.

Reduced D2 receptor densities lead to difficulty in learning from error and negative reinforcement:
Genetically Determined Differences in Learning from Errors (Science)
“Go” and “NoGo”: Learning and the Basal Ganglia (DANA)
This is of particular interest to me due to its implications for ADHD.

Breakdown of Theory of Mind in social, emotional, and moral decision-making:
Mindblindness: An Essay on Autism and Theory of Mind (Google Scholar, book)

PFC damage inhibits normal social/moral behavior:
On the neurology of morals (Nature Neuroscience)

Fundamental neurochemical differences effect social behavior:
The effects of oxytocin and vasopressin on partner preferences in male and female prairie voles (Microtus ochrogaster) (PubMed)

Most of these articles are behind pay-walls, so let me know if you need access to one of them and I’ll use my school account.

This is my brain in Love

A few months ago, Radio Lab– one of my very favorite public radio shows– aired an episode about the neuroscience of Love. The show, in two acts, served as an informative and entertaining primer to a mind-bogglingly complex subject, and did so with all the flair, panache, and quirky musical bumpers that make shows like Radio Lab the easily stereotyped gems they are.

While I found the piece interesting enough, I wasn’t moved to do much more than contemplate the subject a bit and put it on my ever-growing list of things to research. Mostly unmoved, that is, until this weekend, when I met a girl who really turned my head upside-down.

After the waves of intrusive thinking and tummy-knotting anxiety which exemplify Limerence wore off, I came to a now unsurprising realization: Love isn’t mere emotion, it’s a fundamental change in the way we think; a change we have almost no control over. A temporary all-controlling animalistic psychosis that effects us all at one time or anther, driven by three simple, seemingly innocent enough, neurotransmitters. To take a page from the Radio Lab show, lets take a quick look at them:

Dopamine – Real true deeply passionate Love. That amazing ecstatic feeling that comes from seeing and interacting with that special someone. You get the same rush of Dopamine from crack cocaine that you do from Love.

Norepinephrine – Intense infatuation. Norepinephrine focuses the good feelings of dopamine on that one object of your desire.

Oxytocin – Peace and happy contentment that comes with long-term commitment.

The problem here is that Dopamine and Norepinephrine create such powerful emotion that if we were to keep getting squirts of them over a long period of time, we’d literally go insane. It has long been accepted that excessive levels of Dopamine play a large role in Schizophrenia, and anyone who’s ever had a crush can understand why.

As I’m stuck here with too much Norepinephrine floating around the folds of meat inside my skull, I’ll end our quick overview of the subject here, but if you’re interested in learning more, I highly recommend you check out the bit of audio magic that inspired this post, which I linked to in the first paragraph. In addition to a recorded podcast of the show, Radio Lab has provided a number of interesting articles and links on the subject for your further nerdy perusal.

Behind the LOLcat: Schrodinger’s LOLcat

Schrodinger’s LOLcat

A few days ago, I was listening to a podcast lecture on the basics of quantum cryptography when I got into a discussion about the nitty-gritty of the subject with my friend Justin.

…
dantekgeek: exponential on a regular computer, but reasonable time on a quantum computer, right?
justinwick: Right right
justinwick: assuming ur in ur quantum computerz, giving them enuff qbitz
dantekgeek: hahahaha
justinwick: 🙂
justinwick: schrodinger’s lolcat
…

I quickly searched flickr for a suitable image, and came across Kevin Steele’s fantastic “a box for every cat.” Some quick work in Skitch, and Schrodinger’s lolcat was born.

I figured my circle of friends would get a kick out of it, and that maybe it would be picked up by BoingBoing, but could never have predicted the amount of exposure my little creation has received.

Others had the idea long before I came across it, but for whatever reason, it was my LOLcat which gets all the glory. This puts me in kind of a weird position; On one hand, I don’t want to be seen as taking credit for an idea that was already floating in the ether, but the fact remains that we did create this thing without knowledge of prior-art, and I think that should count for something.

I want to make clear that I couldn’t have made this thing on my own, and it was only through the spirit of the meme, my conversation with Justin, and Kevin’s photo that this thing came to fruition. I am but one small robot on the LOLcat assembly line.

I’m in talks with Justin and Kevin about possibly printing up some t-shirts, but nothing is guaranteed– we might choose to just let this thing stay online, where it was born, and where it belongs.

Columbia Study Shows Population Density Affects BMI

Whenever my parents bug me about getting more exercise and loosing weight, I tell them that as soon as I move away to a big city, the pounds will just drop off. Now I have hard data to back me up.

A study recently announced by researchers at the Columbia University Mailman School of Public Health shows a clear link between population density and body mass.

The researchers looked at data from 13,102 adults from New York City’s five boroughs. Matching information on education, income, height, weight and home address with census data and geographic records, they determined respondents’ access to public transit, proximity to commercial goods and services and BMI, a measure of weight in relation to height.

The authors discovered that three characteristics of the city environment - living in areas with mixed residential and commercial uses, living near bus and subway stops and living in population-dense areas - were inversely associated with BMI levels.

Living Near Shops, Subways Linked to Lower Body Mass Index in New York City, According to Mailman School Study

[Via Science Blog]

LA Hospitals Dumping Patients, Spreading Epidemic

CNN and NPR, as well as multiple blogs are reporting on recently released evidence that multiple Los Angeles area hospitals have on multiple occasions discharged patients and left them on LA’s notorious Skid Row; home to a large number of the city’s homeless population. From CNN:

In one case, a man dropped off at Skid Row was in fact not homeless, said Smith, the LAPD captain. A police officer took him home and the man’s family was “outraged,” he said.

“Not only did they not know that he was discharged, but the fact that he had been brought to Skid Row instead of being brought home was what further outraged that family,” Smith said at a news conference Tuesday.

The sergeant called an LAPD videographer, who over the next few hours recorded four more ambulances arriving at the facility and leaving recently discharged patients.

…

Police also said the patients stated in their interviews that they didn’t want to be left there.

These allegations are disgusting enough in and of themselves, but the story gets even worse. LA is currently suffering from an epidemic of Methicillin-resistant Staphylococcus aureus (or Staph infection), which has come to be known as Skid Row Staph. Despite the fact that city public health officials have known about the problem for over a year, almost nothing has been done to combat the spread of the infection. In the case of a Staph infection, which usually enters through surface wounds, extremely simple steps such as providing mobile shower stations and clean clothes for the homeless population would go a very long way toward slowing the spread of the outbreak. Unfortunately, nothing of the sort has been done, and the bacteria has began infecting people outside of the street dwellers. First responders such as Ambulance and Fire, Police, and other street-level workers, as well as hospital staff, have become a second pool from which the disease now feeds. The inaction of city health officials is not only hurting the people with the least means with which to help themselves, but will eventually take a grave toll on the greater population of the city if nothing is done. The way this issue has been handled is not only despicable, but criminal, and those responsible should be punished without mercy.